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Alma universitas studiorum parmensis A.D. 962 - Università di Parma Alma universitas studiorum parmensis A.D. 962 - Università di Parma
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Scienze Matematiche, Fisiche e Informatiche
Università degli Studi di Parma

Biophysics - Publications 2010-2019

Stampa

Publications 2010 - 2019

​2019

  1. Hypericin - apomyoglobin an enhanced photosensitizer complex for the treatment of tumor cells / Bianchini, Paolo; Cozzolino, Marco; Oneto, Michele; Pesce, Luca; Pennacchietti, Francesca; Tognolini, Massimiliano; Giorgio, Carmine; Nonell, Santi; Cavanna, Luigi; Delcanale, Pietro; Abbruzzetti, Stefania; Diaspro, Alberto; Viappiani, Cristiano. – Biomacromolecules, 20(2019), pp. 2024-2033. [10.1021/acs.biomac.9b00222]
  2. Dynamics and efficiency of photoswitching in biliverdin-binding phytochromes / Consiglieri, Eleonora; Alexander, Gutt; Gartner, Wolfgang; Luiz, Schubert; Viappiani, Cristiano; Abbruzzetti, Stefania; Losi, Aba. - Photochem Photobiol Sci, 18:(2019), pp. 2484-2496. [10.1039/c9pp00264b]
  3. Enhanced photosensitizing properties of protein bound curcumin / Cozzolino, Marco; Delcanale, Pietro; Montali, Chiara; Tognolini, Massimiliano; Giorgio, Carmine; Corrado, Miriam; Cavanna, Luigi; Bianchini, Paolo; Diaspro, Alberto; Abbruzzetti, Stefania; Viappiani, Cristiano. - Life Sciences (2019), p. 116710. [10.1016/j.lfs.2019.116710]
  4. More than a Confinement: “Soft” and “Hard” Enzyme Entrapment Modulates Biological Catalyst Function / Cottone, Grazia; Giuffrida, Sergio; Bettati, Stefano; Bruno, Stefano; Campanini, Barbara; Marchetti, Marialaura; Abbruzzetti, Stefania; Viappiani, Cristiano; Cupane, Antonio; Mozzarelli, Andrea; Ronda, Luca. - Catalysts , 9:12(2019), pp. 1024.1-1024.29. [10.3390/catal9121024]
  5. Apomyoglobin is an efficient carrier for zinc phthalocyanine in photodynamic therapy of tumors / Cozzolino, Marco; Pesce, Luca; Pezzuoli, Denise; Montali, Chiara; Brancaleon, Lorenzo; Cavanna, Luigi; Abbruzzetti, Stefania; Diaspro, Alberto; Bianchini, Paolo; Viappiani, Cristiano. – Biophysical Chemistry, 253(2019), pp. 254-262. [10.1016/j.bpc.2019.106228]
  6. Super-resolution microscopy as a powerful tool to study complex synthetic materials / Pujals, S.; Feiner-Gracia, N.; Delcanale, P.; Voets, I.; Albertazzi, L. - Nat Rev Chem, 3:2(2019), pp. 68-84. [10.1038/s41570-018-0070-2]
  7. MAS NMR on a Red/Far-Red Photochromic Cyanobacteriochrome All2699 from Nostoc / Xu, Qian-Zhao; Bielytskyi, Pavlo; Otis, James; Lang, Christina; Hughes, Jon; Zhao, Kai-Hong; Losi, Aba; Gartner, Wolfgang; Song, Chen.. - J. Mol. Sci., 20:15(2019), p. 3656. [10.3390/ijms20153656]
  8. Insight on collagen self-assembly mechanisms by coupling molecular dynamics and UV spectroscopy techniques / Leo, L.; Bridelli, M. G.; Polverini, E. - Biophysical Chemistry, 253(2019), p. 106224. [10.1016/j.bpc.2019.106224]

2018

  1. Menozzi, I.; Polverini, E.; Berni, R. Archives of Biochemistry and Biophysics 2018, 645, 107.
  2. Sala, A.; Cabassi, C. S.; Santospirito, D.; Polverini, E.; Flisi, S.; Cavirani, S.; Taddei, S. PLoS ONE 2018, 13
  3. Pezzuoli, D.; Cozzolino, M.; Montali, C.; Brancaleon, L.; Bianchini, P.; Zantedeschi, M.; Bonardi, S.; Viappiani, C.; Abbruzzetti, S. Food Control 2018, 94, 254.
  4. Delcanale, P.; Galstyan, A.; Daniliuc, C. G.; Grecco, H. E.; Abbruzzetti, S.; Faust, A.; Viappiani, C.; Strassert, C. A. ACS Applied Materials & Interfaces 2018, 10, 24361.
  5. Boubeta, F. M.; Boechi, L.; Estrin, D.; Patrizi, B.; Di Donato, M.; Iagatti, A.; Giordano, D.; Verde, C.; Bruno, S.; Abbruzzetti, S.; Viappiani, C. Journal of Physical Chemistry B 2018, 122, 11649.
  6. Abbruzzetti, S.; Allegri, A.; Bidon-Chanal, A.; Ogata, H.; Soavi, G.; Cerullo, G.; Bruno, S.; Montali, C.; Luque, F. J.; Viappiani, C. Scientific Reports 2018, 8, 10855.
  7. A. Losi, K. Gardner, A. Moeglich, Chemical Reviews, 2018, 118, 10659
  8. W.-L.Ding⁠, Y.-N. Hou⁠, Z.-Z. Tan⁠, S.-P. Jiang⁠, D. Miao, A. Losi⁠, W. Gaertner⁠, H. Scheer⁠, K.-H. Zhao, BBA - Molecular Cell Research, 2018, 1865, 1649 -1656

2017

  1. Ambrico, M.; Ambrico, P. F.; Ligonzo, T.; Cardone, A.; Bridelli, M. G.; Casamassima, G.; Manini, P.; D'Ischia, M. Physical Chemistry Chemical Physics 2017, 19, 9432.
  2. Calvo-Begueria, L.; Cuypers, B.; Van Doorslaer, S.; Abbruzzetti, S.; Bruno, S.; Berghmans, H.; Dewilde, S.; Ramos, J.; Viappiani, C. O.; Becana, M. Frontiers in Plant Science 2017, 8.
  3. Delcanale, P.; Rodríguez-Amigo, B.; Juárez-Jiménez, J.; Luque, F. J.; Abbruzzetti, S.; Agut, M.; Nonell, S.; Viappiani, C. Journal of Materials Chemistry B 2017, 5, 1633.
  4. Ferrari, E.; Capucciati, A.; Prada, I.; Zucca, F. A.; D’Arrigo, G.; Pontiroli, D.; Bridelli, M. G.; Sturini, M.; Bubacco, L.; Monzani, E.; Verderio, C.; Zecca, L.; Casella, L. ACS Chemical Neuroscience 2017, 8, 501.
  5. Losi, A.; Bonomi, H. R.; Michael, N.; Tang, K.; Zhao, K. H. Photochemistry and Photobiology 2017, 93, 733.
  6. Menozzi, I.; Vallese, F.; Polverini, E.; Folli, C.; Berni, R.; Zanotti, G. Journal of Structural Biology 2017, 197, 330.
  7. Russo, R.; Giordano, D.; Paredi, G.; Marchesani, F.; Milazzo, L.; Altomonte, G.; Del Canale, P.; Abbruzzetti, S.; Ascenzi, P.; Di Prisco, G.; Viappiani, C.; Fago, A.; Bruno, S.; Smulevich, G.; Verde, C. PLoS ONE 2017, 12.
  8. Simon, J.; Losi, A.; Zhao, K. H.; Gärtner, W. Photochemistry and Photobiology 2017, 93, 1057.

2016

  1. Cugini, F.; Porcari, G.; Viappiani, C.; Caron, L.; Dos Santos, A. O.; Cardoso, L. P.; Passamani, E. C.; Proveti, J. R. C.; Gama, S.; Brück, E.; Solzi, M. Applied Physics Letters 2016, 108.
  2. Delcanale, P.; Montali, C.; Rodríguez-Amigo, B.; Abbruzzetti, S.; Bruno, S.; Bianchini, P.; Diaspro, A.; Agut, M.; Nonell, S.; Viappiani, C. Journal of Agricultural and Food Chemistry 2016, 64, 8633.
  3. Galstyan, A.; Block, D.; Niemann, S.; Grüner, M. C.; Abbruzzetti, S.; Oneto, M.; Daniliuc, C. G.; Hermann, S.; Viappiani, C.; Schäfers, M.; Löffler, B.; Strassert, C. A.; Andreas, A. Chemistry - A European Journal 2016, 22, 9051.
  4. Santiago-Ruiz S.; Polverini E.; Manjarrez J.; Espinoza K.A.; Reynoso E.; Rivero I.A. Annals of Medicinal Chemistry and Research 2016, 2, 1016.

2015

  1. Tilleman, L.; Abbruzzetti, S.; Ciaccio, C.; De Sanctis, G.; Nardini, M.; Pesce, A.; Desmet, F.; Moens, L.; Van Doorslaer, S.; Bruno, S.; Bolognesi, M.; Ascenzi, P.; Coletta, M.; Viappiani, C.; Dewilde, S., Structural Bases for the Regulation of CO Binding in the Archaeal Protoglobin from Methanosarcina acetivorans. PLoS ONE 2015, 10, (6), e0125959.
  2. Ronda, L.; Bruno, S.; Campanini, B.; Mozzarelli, A.; Abbruzzetti, S.; Viappiani, C.; Cupane, A.; Levantino, M.; Bettati, S., Immobilization of Proteins in Silica Gel: Biochemical and Biophysical Properties. Current Organic Chemistry 2015,19, 1653-1668.
  3. Rodríguez-Amigo, B.; Delcanale, P.; Rotger, G.; Juárez-Jiménez, J.; Abbruzzetti, S.; Summer, A.; Agut, M.; Luque, F. J.; Nonell, S.; Viappiani, C., The complex of hypericin with b-lactoglobulin has antimicrobial activity with perspective applications in dairy industry. Journal of Dairy Science 2015, 98, 89–94.
  4. Pennacchietti, F.; Losi, A.; Xu, X.; Zhao, K.; Gärtner, W.; Viappiani, C.; Zanacchi, F. C.; Diaspro, A.; Abbruzzetti, S., Photochromic conversion in a red/green cyanobacteriochrome from Synechocystis PCC6803: quantum yields in solution and photoswitching dynamics in living E.coli cells. Photochemical & Photobiological Sciences 2015, 14, 229-237.
  5. Knipp, M.; Ogata, H.; Soavi, G.; Cerullo, G.; Allegri, A.; Abbruzzetti, S.; Bruno, S.; Viappiani, C.; Bidon-Chanal, A.; Luque, F. J., Structure and dynamics of the membrane attaching nitric oxide transporter nitrophorin 7 [v1; ref status: indexed]. F100 Research 2015, 4, 45.
  6. Henry, Eric R.; Mozzarelli, A.; Viappiani, C.; Abbruzzetti, S.; Bettati, S.; Ronda, L.; Bruno, S.; Eaton, William A., Experiments on Hemoglobin in Single Crystals and Silica Gels Distinguish among Allosteric Models. Biophysical journal 2015, 109, (6), 1264-1272.
  7. Delcanale, P.; Pennacchietti, F.; Maestrini, G.; Rodríguez-Amigo, B.; Bianchini, P.; Diaspro, A.; Iagatti, A.; Patrizi, B.; Foggi, P.; Agut, M.; Nonell, S.; Abbruzzetti, S.; Viappiani, C., Subdiffraction localization of a nanostructured photosensitizer in bacterial cells. Scientific Reports 2015, 5, 15564.
  8. Decaneto, E.; Abbruzzetti, S.; Heise, I.; Lubitz, W.; Viappiani, C.; Knipp, M., A caged substrate peptide for matrix metalloproteinases. Photochemical & Photobiological Sciences 2015, 14, (2), 300-307.
  9. Coppola, D.; Giordano, D.; Abbruzzetti, S.; Marchesani, F.; Balestrieri, M.; di Prisco, G.; Viappiani, C.; Bruno, S.; Verde, C., Functional characterisation of the haemoglobins of the migratory notothenioid fish Dissostichus eleginoides. Hydrobiologia 2015, 761, (1), 315-333.
  10. Boron, I.; Capece, L.; Pennacchietti, F.; Wetzler, D. E.; Bruno, S.; Abbruzzetti, S.; Chisari, L.; Luque, F. J.; Viappiani, C.; Marti, M. A.; Estrin, D. A.; Nadra, A., Engineered chimeras reveal the structural basis of hexacoordination in globins: A case study of neuroglobin and myoglobin. Biochimica et Biophysica Acta (BBA) - General Subjects 2015,1850, 169–177
  11. Ricci, A.; Dramis, L.; Shah, R.; Gärtner, W.; Losi, A. Visualizing the relevance of bacterial blue- and red-light receptors during plant-pathogen interaction Environmental Microbiology Reports 2015, 7, 795-802.
  12. Losi, A.; Abbruzzetti, S. Photofunctional proteins: How nature keeps the laboratories updated about light and life Photochemical and Photobiological Sciences 2015, 14, 198-199.
  13. Losi, A.; Mandalari, C.; Gärtner, W. The Evolution and Functional Role of Flavin-based Prokaryotic Photoreceptors Photochemistry and Photobiology 2015, 91, 1021-1031.
  14. Kraiselburd, I.; Gutt, A.; Losi, A.; Gärtner, W.; Orellano, E. G. Functional Characterization of a LOV-Histidine Kinase Photoreceptor from Xanthomonas citri subsp. citri Photochemistry and Photobiology2015, 91, 1123-1132.
  15. Bisceglie, F.; Musiari, A.; Pinelli, S.; Alinovi, R.; Menozzi, I.; Polverini, E.; Tarasconi, P.; Tavone, M.; Pelosi, G. Quinoline-2-carboxaldehyde thiosemicarbazones and their Cu(II) and Ni(II) complexes as topoisomerase IIa inhibitors Journal of Inorganic Biochemistry 2015, 152, 10-19
  16. Boron, I.; Capece, L.; Pennacchietti, F.; Wetzler, D. E.; Bruno, S.; Abbruzzetti, S.; Chisari, L.; Luque, F. J.; Viappiani, C.; Marti, M. A.; Estrin, D. A.; Nadra, A. D. Biochimica et Biophysica Acta - General Subjects 2015, 1850, 169.
  17. Coppola, D.; Giordano, D.; Abbruzzetti, S.; Marchesani, F.; Balestrieri, M.; di Prisco, G.; Viappiani, C.; Bruno, S.; Verde, C. Hydrobiologia 2015, 761, 315.
  18. Decaneto, E.; Abbruzzetti, S.; Heise, I.; Lubitz, W.; Viappiani, C.; Knipp, M. Photochemical and Photobiological Sciences 2015, 14, 300.
  19. Delcanale, P.; Pennacchietti, F.; Maestrini, G.; Rodríguez-Amigo, B.; Bianchini, P.; Diaspro, A.; Iagatti, A.; Patrizi, B.; Foggi, P.; Agut, M.; Nonell, S.; Abbruzzetti, S.; Viappiani, C. Scientific Reports 2015, 5.
  20. Henry, E. R.; Mozzarelli, A.; Viappiani, C.; Abbruzzetti, S.; Bettati, S.; Ronda, L.; Bruno, S.; Eaton, W. A. Biophysical Journal 2015, 109, 1264.
  21. Knipp, M.; Ogata, H.; Soavi, G.; Cerullo, G.; Allegri, A.; Abbruzzetti, S.; Bruno, S.; Viappiani, C.; Bidon-Chanal, A.; Luque, F. J. F1000Research 2015, 4.
  22. Kraiselburd, I.; Gutt, A.; Losi, A.; Gärtner, W.; Orellano, E. G. Photochemistry and Photobiology 2015, 91, 1123.
  23. Losi, A.; Abbruzzetti, S. Photochemical and Photobiological Sciences 2015, 14, 198.
  24. Losi, A.; Mandalari, C.; Gärtner, W. Photochemistry and Photobiology 2015, 91, 1021.
  25. Pennacchietti, F.; Losi, A.; Xu, X. L.; Zhao, K. H.; Gärtner, W.; Viappiani, C.; Cella, F.; Diaspro, A.; Abbruzzetti, S. Photochemical and Photobiological Sciences 2015, 14, 229.
  26. Planas, O.; Boix-Garriga, E.; Rodríguez-Amigo, B.; Torra, J.; Bresolí-Obach, R.; Flors, C.; Viappiani, C.; Agut, M.; Ruiz-González, R.; Nonell, S. In Photochemistry 2015; Vol. 42, p 233.
  27. Ricci, A.; Dramis, L.; Shah, R.; Gärtner, W.; Losi, A. Environmental Microbiology Reports 2015, 7, 795.
  28. Ronda, L.; Bruno, S.; Campanini, B.; Mozzarellib, A.; Abbruzzetti, S.; Viappiani, C.; Cupane, A.; Levantino, M.; Bettati, S. Current Organic Chemistry 2015, 19, 1653.

2014

  1. Viappiani C, Abbruzzetti S, Ronda L, Bettati S, Henry ER, Mozzarelli A, Eaton WA (2014) Experimental basis for a new allosteric model for multisubunit proteins. Proc Natl Acad Sci USA 111: 12758-12763
  2. Planas O, Boix-Garriga E, Rodríguez-Amigo T, J.B., Bresolí-Obach R, Flors C, Viappiani C, Agut M, Ruiz-González R, Nonell S (2014) Newest approaches to singlet oxygen photosensitisation in biological media. In: Fasani AAaE, editor. Photochemistry. London: The Royal Society of Chemistry.
  3. Pennacchietti F, Abbruzzetti S, Losi A, Mandalari C, Bedotti R, Viappiani C, Zanacchi FC, Diaspro A, Gärtner W (2014) The dark recovery rate in the photocycle of the bacterial photoreceptor YtvA is affected by the cellular environment and by hydration. PLoS ONE 9: e107489.
  4. Bustamante JP, Abbruzzetti S, Marcelli A, Gauto D, Boechi L, Bonamore A, Boffi A, Bruno S, Feis A, Foggi P, Estrin DA, Viappiani C (2014) Ligand Uptake Modulation by Internal Water Molecules and Hydrophobic Cavities in Hemoglobins. J Phys Chem B 118: 1234–1245
  5. Pennacchietti, F., Losi, A., Xu, X., Zhao, K., Gärtner, W., Viappiani, C., Zanacchi, F. C., Diaspro, A., and Abbruzzetti, S. (2014) Photochromic conversion in a red/green cyanobacteriochrome from Synechocystis PCC6803: quantum yields in solution and photoswitching dynamics in living E.coli cells, Photochemical & Photobiological Sciences in press.
  6. Marchi L, Polverini E, Degola F, Baruffini E, Restivo FM (2014) Glutamate dehydrogenase isoenzyme 3 (GDH3) of Arabidopsis thaliana is less thermostable than GDH1 and GDH2 isoenzymes. Plant Physiology and Biochemistry 83: 225-231.
  7. Chen Zh, Raffelberg S, Losi A, Schaap P, Gärtner W (2014) A cyanobacterial light activated adenylyl cyclase partially restores development of a Dictyostelium discoideum, adenylyl cyclase a null mutant. Journal of Biotechnology. in press

 2013

  1.  Marchi L, Degola F, Polverini E, Terca-Laforgue T, Dubois F, Hirel B, Restivo FM (2013) Glutamate dehydrogenase isoenzyme 3 (GDH3) of Arabidopsis thaliana is regulated by a combined effect of nitrogen and cytokinin. Plant Physiology and Biochemistry 73: 368-374.
  2. Vassall KA, Bessonov K, De Avila M, Polverini E, Harauz G (2013) The Effects of Threonine Phosphorylation on the Stability and Dynamics of the Central Molecular Switch Region of 18.5-kDa Myelin Basic Protein. PLoS ONE 8.
  3. Scaltriti E, Polverini E, Grolli S, Eufemi E, Moineau S, Cambillau C, Ramoni R (2013) The DNA binding mechanism of a SSB protein from Lactococcus lactis siphophage p2. Biochimica et Biophysica Acta - Proteins and Proteomics 1834: 1070-1076.
  4. Raffelberg S, Gutt A, Gärtner W, Mandalari C, Abbruzzetti S, Viappiani C, Losi A (2013) The amino acids surrounding the flavin 7a-methyl group determine the UVA spectral features of a LOV protein. Biological Chemistry 394: 1517-1528.
  5. Raffelberg S, Wang L, Gao S, Losi A, Gärtner W, Nagel G (2013) A LOV-domain-mediated blue-light-activated adenylate (adenylyl) cyclase from the cyanobacterium Microcoleus chthonoplastes PCC 7420. Biochemical Journal 455: 359-365.
  6. Engelhard C, Raffelberg S, Tang Y, Diensthuber RP, Möglich A, Losi A, Gärtner W, Bittl R (2013) A structural model for the full-length blue light-sensing protein YtvA from Bacillus subtilis, based on EPR spectroscopy. Photochemical and Photobiological Sciences 12: 1855-1863.
  7. Losi A (2013) Blue-light photoreceptors: From activation to advanced applications. Photochemical and Photobiological Sciences 12: 1124.
  8. Mandalari C, Losi A, Gärtner W (2013) Distance-tree analysis, distribution and co-presence of bilin- and flavin-binding prokaryotic photoreceptors for visible light. Photochemical and Photobiological Sciences 12: 1144-1157.
  9. Losi A, Gärtner W, Raffelberg S, Cella Zanacchi F, Bianchini P, Diaspro A, Mandalari C, Abbruzzetti S, Viappiani C (2013) A photochromic bacterial photoreceptor with potential for super-resolution microscopy. Photochemical and Photobiological Sciences 12: 231-235.
  10. Bridelli MG, Capelletti R, Mora C (2013) Structural features and functional properties of water in model DMPC membranes: Thermally stimulated depolarization currents (TSDCs) and Fourier transform infrared (FTIR) studies. Journal of Physics D: Applied Physics 46.
  11. Abbruzzetti S, Spyrakis F, Bidon-Chanal A, Luque FJ, Viappiani C (2013) Ligand migration through hemeprotein cavities: insights from laser flash photolysis and molecular dynamics simulations. Physical Chemistry Chemical Physics 15: 10686-10701.
  12. Comas-Barceló J, Rodríguez-Amigo B, Abbruzzetti S, Rey-Puech Pd, Agut M, Nonell S, Viappiani C (2013) A self-assembled nanostructured material with photosensitising properties. RSC Advances 3: 17874-17879.
  13. Gabba M, Abbruzzetti S, Spyrakis F, Bruno S, Mozzarelli A, Luque FJ, Viappiani C, Cozzini P, Nardini M, Germani F, Bolognesi M, Moens L, Dewilde S (2013) CO rebinding kinetics and molecular dynamics simulations highlight dynamic regulation of internal cavities in human cytoglobin. PLoS ONE 8: e49770.
  14. Gensch T, Viappiani C, Braslavsky SE (2013) Laser Induced Optoacoustic Spectroscopy. In: Reedijk J, editor. Elsevier Reference Module in Chemistry, Molecular Sciences and Chemical Engineering. Waltham, MA: Elsevier.
  15. Losi A, Gärtner W, Raffelberg S, Zanacchi FC, Bianchini P, Diaspro A, Mandalari C, Abbruzzetti S, Viappiani C (2013) A photochromic bacterial photoreceptor with potential for super-resolution microscopy. Photochemical and Photobiological Sciences 12: 231–235.
  16. Oliveira A, Allegri A, Bidon-Chanal A, Knipp M, Roitberg AE, Abbruzzetti S, Viappiani C, Luque FJ (2013) Kinetics and computational studies of ligand migration in nitrophorin 7 and its D1-3 mutant. Biochimica et Biophysica Acta - Proteins and Proteomics 1834: 1711-1721.
  17. Pesce A, Tilleman L, Donné J, Aste E, Ascenzi P, Ciaccio C, Coletta M, Moens L, Viappiani C, Dewilde S, Bolognesi M, Nardini M (2013) Structure and haem-distal site plasticity in ferric Methanosarcina acetivorans protoglobin PLoS ONE 8: e66144.
  18. Raffelberg S, Gutt A, Gärtner W, Mandalari C, Abbruzzetti S, Viappiani C, Losi A (2013) The amino acids surrounding the flavin 7a-methyl group determine the UVA spectral features of a LOV protein. Biological Chemistry 394: 1517–1528.
  19. Spyrakis F, Lucas F, Bidon-Chanal A, Viappiani C, Guallar V, Luque FJ (2013) Comparative analysis of inner cavities and ligand migration in non-symbiotic AHb1 and AHb2. Biochimica et Biophysica Acta - Proteins and Proteomics 1834: 1957-1967.

 2012

  1. Ahmed MAM, De Avila M, Polverini E, Bessonov K, Bamm VV, Harauz G (2012) Solution nuclear magnetic resonance structure and molecular dynamics simulations of a murine 18.5 kDa myelin basic protein segment (S72-S107) in association with dodecylphosphocholine micelles. Biochemistry 51: 7475-7487.
  2. Stehling EG, Sforza ML, Zanchin NIT, Oyama S, Pignatelli A, Belluzzi O, Polverini E, Corsini R, Spisni A, Pertinhez TA (2012) Looking over toxin-K + channel interactions. clues from the structural and functional characterization of α-KTx Toxin Tc32, a Kv1.3 Channel Blocker. Biochemistry 51: 1885-1894.
  3. Kraiselburd I, Alet AI, Tondo ML, Petrocelli S, Daurelio LD, Monzon J, Ruiz OA, Losi A, Orellano EG (2012) A LOV protein modulates the physiological attributes of xanthomonas axonopodis pv. citri relevant for host plant colonization. PLoS ONE 7.
  4. Losi A, Gärtner W (2012) The evolution of flavin-binding photoreceptors: An ancient chromophore serving trendy blue-light sensors. Annual Review of Plant Biology. pp. 49-72.
  5. Pathak GP, Losi A, Gärtner W (2012) Metagenome-based screening reveals worldwide distribution of LOV-domain proteins. Photochemistry and Photobiology 88: 107-118.
  6. Abbruzzetti S, He C, Ogata H, Bruno S, Viappiani C, Knipp M (2012) Heterogeneous Kinetics of the Carbon Monoxide Association and Dissociation Reaction to Nitrophorin 4 and 7 Coincide with Structural Heterogeneity of the Gate-Loop. Journal of the American Chemical Society 134: 9986–9998.
  7. Abbruzzetti S, Tilleman L, Bruno S, Viappiani C, Desmet F, Doorslaer SV, Coletta M, Ciaccio C, Ascenzi P, Nardini M, Bolognesi M, Moens L, Dewilde S (2012) Ligation tunes protein reactivity in an ancient haemoglobin: kinetic evidence for an allosteric mechanism in Methanosarcina acetivorans protoglobin. PLoS ONE 7: e33614.
  8. Coppola D, Abbruzzetti S, Nicoletti F, Merlino A, Gambacurta A, Giordano D, Howes BD, DeSanctis G, Vitagliano L, Bruno S, G.diPrisco, Mazzarella L, Smulevich G, Coletta M, Viappiani C, Vergara A, Verde C (2012) ATP regulation of the ligand-binding properties in temperate and cold-adapted haemoglobins. X-ray structure and ligand-binding kinetics in the sub-Antarctic fish Eleginops maclovinus. MOLECULAR BIOSYSTEMS 8: 3295-3304.
  9. Giordano D, Boron I, Abbruzzetti S, VanLeuven W, Nicoletti F, Forti F, Bruno S, Cheng CHC, Moens L, diPrisco G, Nadra A, Estrin D, Smulevich G, Dewilde S, Viappiani C, Verde C (2012) Biophysical characterisation of neuroglobin of the icefish, a natural knockout for hemoglobin and myoglobin. Comparison with human neuroglobin. PLoS ONE 7: e44508.
  10. Knipp M, Taing J, He C, Viappiani C (2012) A caged cyanide. Photochemical and Photobiological Sciences 11: 620-622.
  11. Losi A, Viappiani C (2012) Flavin Mononucleotide-Binding Fluorescent Proteins. In: Roberts GCK, editor. Encyclopedia of Biophysics. Berlin Heidelberg: Springer-Verlag
  12. Marcelli A, Abbruzzetti S, Bustamante JP, Feis A, Bonamore A, Boffi A, Gellini C, Salvi PR, Estrin DA, Bruno S, Viappiani C, Foggi P (2012) Following Ligand Migration Pathways from Picoseconds to Milliseconds in Type II Truncated Hemoglobin from Thermobifida fusca. PLoS ONE 7: e39884.
  13. Nack M, Radu l, Schultz BJ, Resler T, Schlesinger R, Bondar AN, Val Cd, Abbruzzetti S, Viappiani C, Bamann C, Bamberg E, Heberle J (2012) Kinetics of Proton Release and Uptake by Channelrhodopsin-2. FEBS Letters 586: 1344–1348.

2011

  1. Polverini E, Lardi P, Mazzini A, Sorbi RT, Virna C, Ramoni R, Favilla R (2011) Characterization of a deswapped triple mutant bovine odorant binding protein. International Journal of Molecular Sciences 12: 2294-2314.
  2. Polverini E, Coll EP, Tieleman DP, Harauz G (2011) Conformational choreography of a molecular switch region in myelin basic protein-Molecular dynamics shows induced folding and secondary structure type conversion upon threonyl phosphorylation in both aqueous and membrane-associated environments. Biochimica et Biophysica Acta - Biomembranes 1808: 674-683.
  3. Losi A, Gärtner W (2011) Old chromophores, new photoactivation paradigms, trendy applications: Flavins in blue light-sensing photoreceptors. Photochemistry and Photobiology 87: 491-510.
  4. Raffelberg S, Mansurova M, Gärtner W, Losi A (2011) Modulation of the photocycle of a LOV domain photoreceptor by the hydrogen-bonding network. Journal of the American Chemical Society 133: 5346-5356.
  5. Stierl M, Stumpf P, Udwari D, Gueta R, Hagedorn R, Losi A, Gärtner W, Petereit L, Efetova M, Schwarzel M, Oertner TG, Nagel G, Hegemann P (2011) Light modulation of cellular cAMP by a small bacterial photoactivated adenylyl cyclase, bPAC, of the soil bacterium Beggiatoa. Journal of Biological Chemistry 286: 1181-1188.
  6. Abbruzzetti S, Faggiano S, Spyrakis F, Bruno S, Mozzarelli A, Astegno A, Dominici P, Viappiani C (2011) Oxygen and Nitric Oxide Rebinding Kinetics in Nonsymbiotic Hemoglobin AHb1 from Arabidopsis thaliana. IUBMB Life 63: 1094–1100.
  7. Abbruzzetti S, Viappiani C (2011) Volume Changes Associated with Solute–Solvent Reorganization Following Photoinduced Proton Transfer in Aqueous Solutions of 6-Methoxyquinoline. In: Han KL, Zhao GJ, editors. Hydrogen Bonding and Transfer in the Excited State. Chichester: John Wiley & Sons, Ltd. pp. 797-803.
  8. Bettati S, Luque FJ, Viappiani C (2011) Protein dynamics: Experimental and computational approaches. Biochimica et Biophysica Acta - Proteins and Proteomics 1814: 913–915.
  9. Bisht NK, Abbruzzetti S, Uppal S, Bruno S, Spyrakis F, Mozzarelli A, Viappiani C, Kundu S (2011) Ligand migration and hexacoordination in type 1 non symbiotic rice hemoglobin. Biochimica et Biophysica Acta - Proteins and Proteomics 1814: 1042–1053.
  10. Bruno S, Ronda L, Abbruzzetti S, Viappiani C, Bettati S, Maji S, Mozzarelli A (2011) Protein encapsulation, conformations, and nanobiotools. In: Nalwa HS, editor. Encyclopedia of Nanoscience and Nanotechnology: American Scientific Publishers. pp. 481-517.
  11. Coppola D, Bruno S, Ronda L, Viappiani C, Abbruzzetti S, diPrisco G, Verde C, Mozzarelli A (2011) Low affinity PEGylated hemoglobin from Trematomus bernacchii, a model for hemoglobin-based blood substitutes. BMC Biochemistry 12: 66.
  12. Forti F, Boechi L, Bikiel D, Martí MA, Nardini M, Bolognesi M, Viappiani C, Estrin D, Luque FJ (2011) Ligand migration in Methanosarcina acetivorans protoglobin: effects of ligand binding and dimeric assembly. Journal of Physical Chemistry B 115: 13771–13780.
  13. Spyrakis F, Bruno S, Bidon-Chanal A, Luque FJ, Abbruzzetti S, Viappiani C, Dominici P, Mozzarelli A (2011) Oxygen binding to Arabidopsis thaliana AHb2 nonsymbiotic hemoglobin: evidence for a role in oxygen transport. IUBMB Life 63: 355–362.
  14. Spyrakis F, Faggiano S, Abbruzzetti S, Dominici P, Cacciatori E, Astegno A, Droghetti E, Feis A, Smulevich G, Bruno S, Mozzarelli A, Cozzini P, Viappiani C, Bidon-Chanal A, Luque FJ (2011) Histidine E7 dynamics modulates ligand exchange between distal pocket and solvent in AHb1 from Arabidopsis thaliana. Journal of Physical Chemistry B 115: 4138–4146.
  15. Spyrakis F, Luque FJ, Viappiani C (2011) Structural analysis in nonsymbiotic hemoglobins: what can we learn from inner cavities? Plant Science 181: 8-13.

 

2010

  1. Kursula P, Majava V, Polverini E, Mazzini A, Nanekar R, Knoll W, Peters J, Natali F, Baumgärtel P, Kursula I (2010) Structural and functional characterization of human peripheral nervous system myelin protein P2. PLoS ONE 5.
  2. Bedotti R, Bridelli MG, Capelletti R, Polverini E (2010) Thermally Stimulated Depolarization Currents (TSDC): A sensitive technique for analyzing protein structure. Spectroscopy 24: 297-301.
  3. Losi A, Viappiani C, Nonell S (2010) Photofunctional proteins: From understanding to engineering. Photochemical and Photobiological Sciences 9: 1285.
  4. Cao Z, Livoti E, Losi A, Gärtner W (2010) A blue light-inducible phosphodiesterase activity in the cyanobacterium synechococcus elongatus. Photochemistry and Photobiology 86: 606-611.
  5. Tang Y, Cao Z, Livoti E, Krauss U, Jaeger KE, Gärtner W, Losi A (2010) Interdomain signalling in the blue-light sensing and GTP-binding protein YtvA: A mutagenesis study uncovering the importance of specific protein sites. Photochemical and Photobiological Sciences 9: 47-56.
  6. Bridelli MG, Crippa PR (2010) Infrared and water sorption studies of the hydration structure and mechanism in natural and synthetic melanin. Journal of Physical Chemistry B 114: 9381-9390.
  7. Abbruzzetti S, Bizzarri R, Luin S, Nifosì R, Storti B, Viappiani C, Beltram F (2010) Photoswitching of E222Q GFP mutants: "concerted" mechanism of chromophore isomerization and protonation. Photochemical and Photobiological Sciences 9: 1307-1319.
  8. Bizzarri R, Serresi M, Cardarelli F, Abbruzzetti S, Campanini B, Viappiani C, Beltram F (2010) Single aminoacid replacement makes Aequorea victoria fluorescent proteins reversibly photoswitchable. Journal of the American Chemical Society 132: 85–95.
  9. Jiménez-Banzo A, Ragàs X, Abbruzzetti S, Viappiani C, Campanini B, Flors C, Nonell S (2010) Singlet oxygen photosensitisation by GFP mutants: Oxygen accessibility to the chromophore. Photochemical and Photobiological Sciences 9: 1336-1341.
  10. Losi A, Nonell S, Viappiani C (2010) Photofunctional proteins: from understanding to engineering. Photochemical and Photobiological Sciences 9: 1285-1285
  11. Nienhaus K, Dominici P, Astegno A, Abbruzzetti S, Viappiani C, Nienhaus GU (2010) Ligand migration and binding in non-symbiotic hemoglobins of Arabidopsis thaliana. Biochemistry 49: 7448–7458.
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